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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872269.1_cds_XP_016434723.1_30751
CDS Infomation

[gene=LOC107761067] [db_xref=GeneID:107761067] [protein=probable protein phosphatase 2C 12 isoform X2] [protein_id=XP_016434723.1] [location=complement(join(11883..11911,11992..12194,12305..12540,12636..12761,13603..13710,13944..14007,14096..14249,14531..14642,15442..15639))] [gbkey=CDS]
Sequence

ATGTTGTCCAAGGGTGAACATCAAACGGTCCCATTGTCTGTATTGCTGAAAAGGGAATTG
GCCAATGAGAAGATTGAAATGCCCGAGATTTGTCACGGTCAAGCTAGTCAGAGCAAGAAA
GGGGAAGACTTCACCTTCCTCAAGACCGAATGCCAGCGGGTTTTGGGAGATGGAGTTACT
ACCTTTTCTGTTTTTGGGAATGTCTTGAGTGCTATTCCCTCAGACCTCAACAGAGATGAG
TGGGTTGCAGCATTGCCTAGGGCTTTGGTTGCAGGATTCGTCAAGACAGACAAAGAATTC
CAAGAAAAAGCACAGAAATCAGGGACAACAGTCACCTTCGTTATAATTGAAGGATGGGTT
GTAACAGTTGCATCAGTTGGCGATTCTCGATGTATATTAGAATCTGCTGAAGGGGGAATT
TATTATCTATCAGCTGATCATAGACTAGAGTGCAATGAAGAGGAGAGGGAACGCATAACA
GCAAGTGGTGGAGAGGTTGGTCGGCTTAATACTGGCGGTGGAACACAGATTGGTCCTTTG
AGATGTTGGCCTGGTGGGTTATGCCTCTCTCGATCCATTGGAGATATGGATGTTGGCGAG
TTCATTGTTCCTGTACCGTATGTAAAGCAAGTAAAGCTATCTTCAGCAGGTGGAAGGCTT
GTAATAGCAAGTGATGGTGTCTGGGATGCTTTGTCTGCAGAAATGGCTGTAGAATGTTGT
CGTGGAATGCCTCCGGATGCTGCAGCTTCTCAAATTGTTAAGGAAGCCGTGCAGCCAAAA
GGGATTCGAGATGACACTACCTGTATTGTGGTTGATATACAGCCCCCAGAAAAGCCAAAT
CCTCCCCAGCCACCACCCAAAAAGTCAGGGAAGAAAGTGTTTAAGTCTATATTTCGCAAA
ATAACATCCGAGTCATCTTCTAATACTGAGAGAGATTATGATGAACCAGATGTTGTGGAA
GAACTATTTGAGGAAGGATCTGCATCACTTTCTGACAGGTTAGATGCTAAGTATCCAGTT
TGCAACATGTTTAAGTTATTCATGTGTGCTGTCTGTCAAGTAGAGATAAAACCTGGAGAG
GGTATTTCAATACATGCTGGCTCTTTGAATACAAGAAACGTTCGTCCATGGGATGGCCCT
TTCCTTTGCTCAAGCTGCCAAGTGAAGAAAGAAGCCATGGAAGGAAAAAGACCTTCCGGA
AATGGAAGATATAATAGTGACAGCGACTAG

Peptide Sequence

PEP ID

XP_016434723.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 12 isoform X2 [Nicotiana tabacum]
Sequence

MLSKGEHQTVPLSVLLKRELANEKIEMPEICHGQASQSKKGEDFTFLKTECQRVLGDGVT
TFSVFGNVLSAIPSDLNRDEWVAALPRALVAGFVKTDKEFQEKAQKSGTTVTFVIIEGWV
VTVASVGDSRCILESAEGGIYYLSADHRLECNEEERERITASGGEVGRLNTGGGTQIGPL
RCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSAGGRLVIASDGVWDALSAEMAVECC
RGMPPDAAASQIVKEAVQPKGIRDDTTCIVVDIQPPEKPNPPQPPPKKSGKKVFKSIFRK
ITSESSSNTERDYDEPDVVEELFEEGSASLSDRLDAKYPVCNMFKLFMCAVCQVEIKPGE
GISIHAGSLNTRNVRPWDGPFLCSSCQVKKEAMEGKRPSGNGRYNSDSD

Transcript Sequence

Gene sequence data has not been registered.